Проблема домашней папки Ubuntu

Используйте expect ( man expect )

#!/usr/bin/expect
#set timeout 10
set clientName [lindex $argv 0];
set hostName [lindex $argv 1];
set passWord [lindex $argv 2];

spawn ssh "$hostName";
expect "Password:";
send "$passWord\r";
expect "$hostName";

send "cd /apps/bin\r";
expect " bin]";