Используйте/Видьте целый пространство флэш-памяти

Вы можете сделать это в чистом виде Массивы:

#!/usr/bin/env bash

## Declare the various arrays we will be using
declare -A hasfeat;
declare -A names;
declare -A features;
## The input file
file="/path/to/file"

## The awk is used to skip the first line, the header
awk 'NR>1' "$file" |
    {
        while read name feat;
        do
            ## Save the names
            names[$name]=1;
            ## Save the features
            features[$feat]=1;
            ## Save this name/feature combination
            hasfeat[$name,$feat]=1;
        done
        ## For each name in the file
        for name in ${!names[@]}
        do
            ## For each feature in the file
            for feat in ${!features[@]}
            do
                ## Print the name if it doesn't have this feature
                [ -z ${array[$name,$feat]} ] && echo $name lacks $feat
            done
        done;
    }

или, гораздо более кратко, в Perl:

$ perl -lane 'if($.>1){$l{$F[1]}++;$k{$F[0]}{$F[1]}++}
  END{foreach $f (keys(%l)){ 
    map{print "$_ lacks $f" unless $k{$_}{$f}}keys(%k)
    }}' file